BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C05LP1|AL427732
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1790 1449 0.0
>3x_Contig1790
Length = 27369
Score = 1449 bits (729), Expect = 0.0
Identities = 734/737 (99%)
Strand = Plus / Plus
Query: 1 cctttctgcttctctccgtatacttkagtgttggtccattttttggtaatggaaccggca 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 24969 cctttctgcttctctccgtatacttgagtgttggtccattttttggtaatggaaccggca 25028
Query: 61 actctgttwggaagtttccctcttatcagtacgcagctattttcctattcgcactttccg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25029 actctgttgggaagtttccctcttatcagtacgcagctattttcctattcgcactttccg 25088
Query: 121 tgggcttctggttcatgaagtttgtattgcttcccagattgtttaaatacactcttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25089 tgggcttctggttcatgaagtttgtattgcttcccagattgtttaaatacactcttagaa 25148
Query: 181 gcactgttgttgtacaaaatgacggactaacagttgtggactggaggagacatcctgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25149 gcactgttgttgtacaaaatgacggactaacagttgtggactggaggagacatcctgtag 25208
Query: 241 aatagaactcaggaaatttgctgaagaataataaaatgtttaaaacttttctgcgactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25209 aatagaactcaggaaatttgctgaagaataataaaatgtttaaaacttttctgcgactat 25268
Query: 301 tatatattgaattattactactcccgattaaataatacttctcaatttgcattgagcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25269 tatatattgaattattactactcccgattaaataatacttctcaatttgcattgagcttt 25328
Query: 361 ttgacaaatgattctttggctaattgtatcaagacttctaattctccactatcttcacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25329 ttgacaaatgattctttggctaattgtatcaagacttctaattctccactatcttcacac 25388
Query: 421 atatgatagaatatactatcacgattcaacaataaggagtaaggatgatcatattcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25389 atatgatagaatatactatcacgattcaacaataaggagtaaggatgatcatattcttta 25448
Query: 481 acctccccagcatccataacaagtattttatcataatcaataattgatcgtaaacgatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25449 acctccccagcatccataacaagtattttatcataatcaataattgatcgtaaacgatga 25508
Query: 541 gcaatcgtgagaatggtactattactgaattcttcccttatagtagcctggattttagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25509 gcaatcgtgagaatggtactattactgaattcttcccttatagtagcctggattttagag 25568
Query: 601 tctgagttataatcgattgaagctgtggcttcatcaagtagaattacctttggacaccgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25569 tctgagttataatcgattgaagctgtggcttcatcaagtagaattacctttggacaccgc 25628
Query: 661 aataatgaacgggccaaacatatcaattgacgttgtccttgtgagaggttggaaccacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25629 aataatgaacgggccaaacatatcaattgacgttgtccttgtgagaggttggaaccacct 25688
Query: 721 tcactgasttcattttc 737
||||||| |||||||||
Sbjct: 25689 tcactgacttcattttc 25705
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5464
Number of Sequences: 1807
Number of extensions: 5464
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)